Sfoglia per Autore
Reactive force field simulation of proton diffusion in BaZrO3 using an empirical valence bond approach
2011-01-01 Raiteri, P.; Gale, J. D.; Bussi, G.
RNA Unwinding from Reweighted Pulling Simulations
2012-01-01 Colizzi, F.; Bussi, G.
Role of the Subunit Interactions in the Conformational Transitions in Adult Human Hemoglobin: an Explicit Solvent Molecular Dynamics Study
2012-01-01 Yusuff, O. K.; Babalola, J. O.; Bussi, G.; Raugei, S.
Understanding CNG Channels Gating Process by MD Simulations
2012-01-01 Valbuena, A; Bussi, Giovanni
Metadynamics with adaptive Gaussians
2012-01-01 Branduardi, D.; Bussi, G.; Parrinello, M.
Ab initio complex band structure of conjugated polymers: Effects of hydrid density functional theory and GW schemes
2012-01-01 Ferretti, A.; Mallia, G.; Martin-Samos, L.; Bussi, G.; Ruini, A.; Montanari, B.; Harrison, N. M.
Symmetry and asymmetry in the unwinding of nucleic acids
2013-01-01 Colizzi, F.; Levy, Y.; Bussi, G.
Structural Role of Uracil DNA Glycosylase for the Recognition of Uracil in DNA Duplexes. Clues from Atomistic Simulations
2013-01-01 Franco, D.; Sgrignani, J.; Bussi, G.; Magistrato, A.
RNA unwinding: What we can learn from atomistic simulations
2013-01-01 Colizzi, F.; Bussi, G.
RNA/Peptide Binding Driven by Electrostatics-Insight from Bidirectional Pulling Simulations
2013-01-01 Do, T. N.; Carloni, P.; Varani, G.; Bussi, G.
Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch
2013-01-01 Di Palma, F.; Colizzi, F.; Bussi, G.
Nearest neighbor parameters for RNA from metadynamics simulations
2013-01-01 Darvas, M.; Bussi, G.
Conformational transitions in adenine sensing riboswitch: A computational study
2013-01-01 Di Palma, F.; Colizzi, F.; Bussi, G.
Probing Riboswitch Binding Sites with Molecular Docking, Focused Libraries, and In-line Probing Assays
2014-01-01 Colizzi, Francesco; Lamontagne, A. M.; Lafontaine, D. A.; Bussi, Giovanni
Enhanced sampling in molecular dynamics using metadynamics, replica-exchange, and temperature-acceleration
2014-01-01 Abrams, C.; Bussi, G.
PLUMED 2: New feathers for an old bird
2014-01-01 Tribello, G. A.; Bonomi, Massimiliano; Branduardi, D.; Camilloni, C.; Bussi, Giovanni
Bowl Inversion of Surface-Adsorbed Sumanene
2014-01-01 Jaafar, R.; Pignedoli, C. A.; Bussi, Giovanni; Aït Mansour, K.; Groening, O.; Amaya, T.; Hirao, T.; Fasel, R.; Ruffieux, P.
The Role of Nucleobase Interactions in RNA Structure and Dynamics
2014-01-01 Bottaro, Sandro; Di Palma, Francesco; Bussi, Giovanni
Role of Magnesium Ions and Ligand Stacking in the Adenine Riboswitch Folding
2014-01-01 Di Palma, Francesco; Colizzi, Francesco; Bussi, Giovanni
Hamiltonian replica-exchange in GROMACS: a flexible implementation
2014-01-01 Bussi, G.
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