FROEHLKING, THORBEN
FROEHLKING, THORBEN
Scuola Internazionale Superiore di Studi Avanzati
Automatic Learning of Hydrogen-Bond Fixes in the AMBER RNA Force Field
2022-01-01 Froehlking, Thorben; Mlýnský, Vojtěch; Janeček, Michal; Kührová, Petra; Krepl, Miroslav; Banáš, Pavel; Šponer, Jiří; Bussi, Giovanni
Evaluation of novel computational methods to identify RNA-binding protein footprints from structural data
2025-01-01 Mizrahi, Orel; Corley, Meredith; Feldman, Ori; Froehlking, Thorben; Sun, Lei; Ziesel, Alison; Antczak, Maciej; Bernetti, Mattia; Elhajjajy, Shaimae I; Huang, Wenze; Nguyen, Grady G; Park, Samuel S; Perez Martell, Raul I.; Trinity, Luke; Xu, Kui; Zok, Tomasz; Bussi, Giovanni; Jabbari, Hosna; Orenstein, Yaron; Aviran, Sharon; Meyer, Michelle M; Yeo, Gene
Machine learning RNA force fields from experimental data
2022-09-30 Froehlking, Thorben
Molecular Simulations Matching Denaturation Experiments for N-6-Methyladenosine
2022-01-01 Piomponi, V; Froehlking, T; Bernetti, M; Bussi, G
Simultaneous refinement of molecular dynamics ensembles and forward models using experimental data
2023-01-01 Froehlking, Thorben; Bernetti, Mattia; Bussi, Giovanni
Toward Convergence in Folding Simulations of RNA Tetraloops: Comparison of Enhanced Sampling Techniques and Effects of Force Field Modifications
2022-01-01 Mlýnský, Vojtěch; Janeček, Michal; Kührová, Petra; Froehlking, Thorben; Otyepka, Michal; Bussi, Giovanni; Banáš, Pavel; Šponer, Jiří
Toward empirical force fields that match experimental observables
2020-01-01 Froehlking, Thorben; Bernetti, Mattia; Calonaci, Nicola; Bussi, Giovanni